PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g444430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 203aa    MW: 22477.6 Da    PI: 8.3731
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g444430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260144.14.2e-4511109199
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++e
  Pd.00g444430.m01  11 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKE 103
                       7******************************************************************************************** PP

            DUF260  94 lallke 99 
                       l+++++
  Pd.00g444430.m01 104 LDSANA 109
                       *99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MASSSSSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPQKF ANVHKIFGAS NVTKLLNELL  60
PHQREDAVNS LAYEAEARVR DPVYGCVGAI SFLQRQVQRL QKELDSANAD LIRYACNEIT  120
TATVLPPPVS LPTGLNSVIQ PNMAPRRRSV DHHPHHQFYQ QINNTSTTGG AFSAPYLPWN  180
DIHNRFVNGI DGEAGLKLLL NIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.25e-77LBD family protein