PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g444690.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 173aa    MW: 19352.8 Da    PI: 7.1939
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g444690.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.28.7e-362871499
            DUF260 14 kdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
                      ++C++apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++el+++++
  Pd.00g444690.m01  2 PGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANA 87
                      78*******************************************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MPGCIFAPYF PPEEPQKFAN VHKIFGASNV TKLLNELLPH QREDAVNSLA YEAEARVRDP  60
VYGCVGAISF LQRQVQRLQK ELDSANADLI RYACNEITTA TVLPPPVSLP TGLNSVIQPN  120
MAPRRRSVDH HPHHQFYQQI NNTSTTGGAF SAPYLPWNDI HNREKYDTVS TVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.21e-63LBD family protein