PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g446700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 421aa MW: 49115.6 Da PI: 7.9138

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g446700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.3	4.1e-26	241	331	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +Y+++ GF+vr++++++s+ n++++ ++fvCskeg+r+++ +++++ + ++tr gC+a++++ +++ kw+vtk+++eHnH+l+ Pd.00g446700.m01 241 EFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLM 331 6****************************************99883332.245899******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MLLRKQFYPV GYEDERRYKW QHFRQRFGQP VQENTTEFRN QAMVLDINVD DFDVFMKYTG 60 GLANYVRKEL KLFTVDGIEE VTAKAIIIEA KKKRIDKKDD RSKLVNKTDW QKKRKQSKEG 120 QTKMKRWGPA TSCKINHLGS WSGHGEIDLR LPLSSNLGVG VWNIMDHQSV HGFDSDESDL 180 DMHAETYENN EGMEDVLSEN LDLCLDEKEG IAEPSADLPM NIEALEPNIG MEFNSRDEAR 240 EFYVAYGRRS GFTVRIHHNR RSRVNNQVIG QDFVCSKEGF RAKKYVHRKD RVLPPPPVTR 300 EGCQAMIRLA LRDGLKWVVT KFVKEHNHKL MSPSKVPWRG SGKHLASEDE KDKRIRELSL 360 ELYNERQKCK RRCAAYEEQL NLILKDLEKH TEHMSKKVAD IVQSIREIEE EQSEDSDSGW 420 T

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MLLRKQFYPV GYEDERRYKW QHFRQRFGQP VQENTTEFRN QAMVLDINVD DFDVFMKYTG  60
GLANYVRKEL KLFTVDGIEE VTAKAIIIEA KKKRIDKKDD RSKLVNKTDW QKKRKQSKEG  120
QTKMKRWGPA TSCKINHLGS WSGHGEIDLR LPLSSNLGVG VWNIMDHQSV HGFDSDESDL  180
DMHAETYENN EGMEDVLSEN LDLCLDEKEG IAEPSADLPM NIEALEPNIG MEFNSRDEAR  240
EFYVAYGRRS GFTVRIHHNR RSRVNNQVIG QDFVCSKEGF RAKKYVHRKD RVLPPPPVTR  300
EGCQAMIRLA LRDGLKWVVT KFVKEHNHKL MSPSKVPWRG SGKHLASEDE KDKRIRELSL  360
ELYNERQKCK RRCAAYEEQL NLILKDLEKH TEHMSKKVAD IVQSIREIEE EQSEDSDSGW  420
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	6e-38	FAR1 family protein