PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g451560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 478aa    MW: 52800.2 Da    PI: 6.0177
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g451560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS434.11e-132924521374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lL++cA+ v+ gdl+la +l++++++l  + ++   + ++a yf  AL++r+++         +ps +s     e+   +++f+e++P+l
  Pd.00g451560.m01  92 LVHLLVTCADSVQRGDLALAGSLIENMQTLltRVNTSCGIGKVAGYFIDALSRRIFS---------HPSVAS---AHENELLHHYFYEACPYL 172
                       68***************************954444446899***************9.........333333...3344455578******** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaIlea++g+++vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++v+f f+ ++a+
  Pd.00g451560.m01 173 KFAHFTANQAILEAFQGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNVRFAFRGVAAS 265
                       ********************************************************************************************* PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       rled+++++L+v+p+Ea+aVn+++qlhrll ++ + +s+++ +L  +++l+Pk+v+vveqeadhn++ Fl+rf+eal+yys++fdslea    
  Pd.00g451560.m01 266 RLEDVKPWMLQVSPKEAVAVNSIMQLHRLLGSDPNRNSPIEMMLGWIRNLNPKIVTVVEQEADHNKTGFLDRFTEALYYYSTMFDSLEAC--- 355
                       ***************************************************************************************999... PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       + + ++ + +++++rei+nvv+cega+r+erhe l+kWr+rl++aGF+p++l+++a kqa++ll  ++ +gyrvee++g+l+lgW++rpL+++
  Pd.00g451560.m01 356 AMQPEKALAEMYIQREICNVVCCEGAARVERHEPLGKWRARLGQAGFRPLHLGSNAFKQASMLLTLFSAEGYRVEENDGCLTLGWHSRPLIAA 448
                       467777888899********************************************************************************* PP

              GRAS 371 SaWr 374
                       SaW+
  Pd.00g451560.m01 449 SAWQ 452
                       ***6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MGPYGSTVCS GIASDAVLYN PSDIATWVDS LLSEFNHQPL ISLPSDLDFP DAIINPTDLP  60
NNTWTEPLPP PQQQHHQLTV VTAMEEDSGI RLVHLLVTCA DSVQRGDLAL AGSLIENMQT  120
LLTRVNTSCG IGKVAGYFID ALSRRIFSHP SVASAHENEL LHHYFYEACP YLKFAHFTAN  180
QAILEAFQGH DCVHVIDFNL MHGLQWPALI QALALRPGGP PLLRLTGIGP PSPDGRDSLR  240
EIGLRLAELA RSVNVRFAFR GVAASRLEDV KPWMLQVSPK EAVAVNSIMQ LHRLLGSDPN  300
RNSPIEMMLG WIRNLNPKIV TVVEQEADHN KTGFLDRFTE ALYYYSTMFD SLEACAMQPE  360
KALAEMYIQR EICNVVCCEG AARVERHEPL GKWRARLGQA GFRPLHLGSN AFKQASMLLT  420
LFSAEGYRVE ENDGCLTLGW HSRPLIAASA WQVMPTAEAT TANQPVGVIN QNNNANHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-132GRAS family protein