PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g451960.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 235aa MW: 26487.4 Da PI: 5.2859

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g451960.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.1e-12	68	111	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L Pd.00g451960.m01 68 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 111 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MVEDEEFGGF LGSENQRGCL EESKNIATCK VEMEQQATDH IPSAFNMGLC GEKRSKAKKL 60 EGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI LGDTIDYMKE LLERINKLQE 120 EGIEEGTNQI NLMDISKELK PSEVLVRNSP KFDVERRDMD TRIDICCAAK PGLLLSTVNT 180 IEALGLEIQQ CVISCFNDFS MQASCSEGAE QRTLLSPEDI KQALFRNAGY GGRCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	53	59	KRSKAKK
2	71	78	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	3e-94	bHLH family protein