PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g455460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 76aa    MW: 8690.65 Da    PI: 7.001
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g455460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.5e-05222323
                      ETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                      C +Cgk F  + + ++H +++
  Pd.00g455460.m01  2 CRKCGKAFAVRGDWRTHEKNC 22
                      *****************9987 PP
2zf-C2H210.90.00152946522
                      TTTEEESSHHHHHHHHHH CS
           zf-C2H2  5 dCgksFsrksnLkrHirt 22
                       Cg  F++k +Lk Hi+ 
  Pd.00g455460.m01 29 TCGSDFKHKRSLKDHIKA 46
                      69**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MCRKCGKAFA VRGDWRTHEK NCGKLWYCTC GSDFKHKRSL KDHIKAFGHG HAAYGIDCFE  60
EDDDAASEIE ENYSSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.13e-36C2H2 family protein