PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g457980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 457aa MW: 49970.1 Da PI: 6.449

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g457980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.6e-17	132	181	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pd.00g457980.m01 132 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 181 78*****************......55**********************997 PP
2	AP2	40.2	8.7e-13	224	274	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g Pd.00g457980.m01 224 SRYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 274 79******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MLDLNLNVVG SGPNDVESCG TQMNESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN 60 FDILKVRGGE DEEDDVVVTK ELFPVTGALS KWPGQGQSSA SSSLVRKNLM ELGFDHGGSG 120 EKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR 180 GVDADINYNL SDYEEDLKQM KNLTKEEFVH ILRRQSTGFS RGSSRYRGVT LHKCGRWEAR 240 MGQFLGKKYI YLGLFDSEVE AARAYDKAAI KCNGREAVTN FEPSTYEGEM ISEAGNEDGD 300 HNLDLNLGIS PPSFGNCQKE VEGHLQFHSG PYDGHNGNRM EHNVNATMSD PPFKGLVMTS 360 QHPPLWNGVY PSYFSNQERA TEKRIALGSQ GPPNWAWQMH GQVSATPMPL FSTAASSGFS 420 FSATAPSAAV HPLQPSTPTA LNLCFTSPAT AAANTSQ

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MLDLNLNVVG SGPNDVESCG TQMNESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN  60
FDILKVRGGE DEEDDVVVTK ELFPVTGALS KWPGQGQSSA SSSLVRKNLM ELGFDHGGSG  120
EKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR  180
GVDADINYNL SDYEEDLKQM KNLTKEEFVH ILRRQSTGFS RGSSRYRGVT LHKCGRWEAR  240
MGQFLGKKYI YLGLFDSEVE AARAYDKAAI KCNGREAVTN FEPSTYEGEM ISEAGNEDGD  300
HNLDLNLGIS PPSFGNCQKE VEGHLQFHSG PYDGHNGNRM EHNVNATMSD PPFKGLVMTS  360
QHPPLWNGVY PSYFSNQERA TEKRIALGSQ GPPNWAWQMH GQVSATPMPL FSTAASSGFS  420
FSATAPSAAV HPLQPSTPTA LNLCFTSPAT AAANTSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-118	AP2 family protein