PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g459350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family YABBY
Protein Properties Length: 188aa    MW: 21274 Da    PI: 8.0083
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g459350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY218.42.2e-6761614170
             YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                       + s+eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+  +         ++++ + + +n++    ++++ ++++
  Pd.00g459350.m01   6 DVSTEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWPDV--------QAQNYNYNAQNYRIESGSSSKCNKKI 90 
                       5689********************************************99999998885........56666666666666555555544444 PP

             YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       ++    + + ++v++   v+rPPekrqrvPsayn+fikeeiqrika+nPdish+eafs+aaknWahfP+ihfgl
  Pd.00g459350.m01  91 AT---RDPTADHVTEERGVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHKEAFSTAAKNWAHFPHIHFGL 161
                       44...4555666777778******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MTSCIDVSTE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS  60
WPDVQAQNYN YNAQNYRIES GSSSKCNKKI ATRDPTADHV TEERGVNRPP EKRQRVPSAY  120
NQFIKEEIQR IKANNPDISH KEAFSTAAKN WAHFPHIHFG LMLETNNQPK LDNDSEKHLM  180
SRAALLNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.12e-87YABBY family protein