PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g460040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 381aa    MW: 42391.6 Da    PI: 4.4264
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g460040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.44e-25101421128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                       lp+Gf+F+P+d++l+ +yL +kv+g+++  ++vi+e+d+y k+ePwd+ +    +  a+ +++yfF+k ++ + +++r+ r++ sg+Wk   +
  Pd.00g460040.m01  10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGENS 102
                       79**************************99999*****99568*****742444222366799**************************9999 PP

               NAM  89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++v +   k+++ g+ k + +   + ++ +   W+mhey+l
  Pd.00g460040.m01 103 GTTVSDPenKENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142
                       99999886566779999999886..566667999******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MAPCESAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE  180
TGTPVQSQNK RQSPQQVTSF EELIGDCTPM SEATGVGGSV SYLPTGLTQS QPDSSFAYPT  240
TVVSSQARAN YTDDVSQFHG GGDGDALMSD FSHSDTAQPF TEQALGSYAV CNQERASDVY  300
ETQQGLALTD NNIGYWPSPF GSEEDKVNAL DFSMDYDLLN HLIDCDDDND GPRQSSTAQF  360
MGMGMENTTT ASSEANMVII D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167173RGKRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.13e-18NAC family protein