PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g460480.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 218aa MW: 24728.1 Da PI: 8.491

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g460480.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	35	81	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + WT+eEd++l+++v+ +G g+W+t++++ g+ R++k+c++rw +yl Pd.00g460480.m01 35 NLWTPEEDLILKKYVETHGEGNWATVSQRSGLMRCGKSCRLRWKNYL 81 56*******************************************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	87	132	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l Pd.00g460480.m01 87 RGHMSQEEQDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 132 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MIEDHTVRAS DLTNVISLTW KPAAANANAQ APKKNLWTPE EDLILKKYVE THGEGNWATV 60 SQRSGLMRCG KSCRLRWKNY LRPNIKRGHM SQEEQDLIIR MHKLLGNRWS LIAGRLPGRT 120 DNEVKNYWNT HLNKMSCPAA TKRKKSPIFT SHHDCLQYLP TNLNATFLFD HDEPFIAADA 180 ASSSSYLDSF LFFEAFGSSA ADMESVLPLA CADHHLGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	4e-62	MYB family protein