PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g462440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 181aa    MW: 20510.2 Da    PI: 7.1787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g462440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18754253
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                      +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ +
  Pd.00g462440.m01  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLM 54
                      69******9.**********8.....334*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MARSHQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGTKAR  60
TNFSYNPNET MSHSSKLLST ALIAKLHKCN MASLQMAKTT NNKPVPKEEP QQQVHYMPAA  120
PSATCIIETG DVSGFDWPEK IREYSGVQQW VEQGSWVGGD DQMIEELLDY GHIEICPGVS  180
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.16e-46ERF family protein