PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g465660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 207aa MW: 22379.2 Da PI: 8.9964

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g465660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.8	2e-34	57	176	3	103
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....... 88 k ++ ++hTkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+ a+ +i ++tgt++ +a+ ++++ ++s++ +s + Pd.00g465660.m01 57 RKSASSRDRHTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRHAESSIVAATGTGTLPAEPISTSAPVVSSQVPSLAcrahpls 149 5778999********************************************************888886666666666666444445555565 PP TCP 89 .............kaaksaakskksqks 103 + ++ +a++++++++ Pd.00g465660.m01 150 slngggqfmyplvS-SAHQAQPNQPHQQ 176 66666677776531.2222244444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MGSEMALAPL LNHEDPTLIP TAVLSSAALE TASSRQHSQQ SIQSLQPKTH NQLSQTRKSA 60 SSRDRHTKVN GRGRRVRMPA MCAARIFQLT RELGHRSDGE TIEWLLRHAE SSIVAATGTG 120 TLPAEPISTS APVVSSQVPS LACRAHPLSS LNGGGQFMYP LVSSAHQAQP NQPHQQPSIR 180 LDLCQPAGLD YTECTSVAKQ VYFTTLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	8e-35	TCP family protein