PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g473490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 556aa MW: 60634.7 Da PI: 4.1248

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g473490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88.3	1.4e-27	257	331	54	129
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ +wyfF++r+kky++g+r +rat+ gyWk+tgkd++vl +g+ vg ktL+f++grap+g +t+Wvmheyrle Pd.00g473490.m01 257 GDLKWYFFCPREKKYRSGNRIQRATEGGYWKTTGKDRSVLY-SGAIVGWIKTLIFHTGRAPSGDRTNWVMHEYRLE 331 5669***********************************.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MHEYRLEDQG LADRGVPLDS YVICMIFQKD GLGPKIGAQY GAPFKEEDWT DDEAEICSEA 60 IAHENMCEPN LVVPSNCNSS ITTSGHSPKG IHTSPSESCI SDVLPPSCNI HQLVSSNRVT 120 MEKLHGSDDD ILSMLNCFTE GSTSLMKEND KNEELGNVIP SGNAGATPNF NSDDIYEDLG 180 DLGKMARVSE DGYNFSSVHN SICAPSQMPL GGNEQFLELD DLSCVLSSLV VCSCFSISFS 240 ILGPSFCTRY KSCWDCGDLK WYFFCPREKK YRSGNRIQRA TEGGYWKTTG KDRSVLYSGA 300 IVGWIKTLIF HTGRAPSGDR TNWVMHEYRL EDQGLADRGV PLDSYVLCMI FQKEGLGPRI 360 GAQYGAPFKE EDWSDDEVEI TSEAVQVAIT PEPDLGLPCN YVSPTATNAH SVGDIGVGPS 420 GSGIYDILPP FCEVSQPVSS NYVTLEMPLA SVGDDIISMF DCFTEESALY TDGPKKVEVE 480 GRLETVQNAN MPSTHSPEVI GVGPSFESCG FDVLPPCNVN KSFVTMENPP ASNGDETLPI 540 MDCFAEESVF LVNDNG

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MHEYRLEDQG LADRGVPLDS YVICMIFQKD GLGPKIGAQY GAPFKEEDWT DDEAEICSEA  60
IAHENMCEPN LVVPSNCNSS ITTSGHSPKG IHTSPSESCI SDVLPPSCNI HQLVSSNRVT  120
MEKLHGSDDD ILSMLNCFTE GSTSLMKEND KNEELGNVIP SGNAGATPNF NSDDIYEDLG  180
DLGKMARVSE DGYNFSSVHN SICAPSQMPL GGNEQFLELD DLSCVLSSLV VCSCFSISFS  240
ILGPSFCTRY KSCWDCGDLK WYFFCPREKK YRSGNRIQRA TEGGYWKTTG KDRSVLYSGA  300
IVGWIKTLIF HTGRAPSGDR TNWVMHEYRL EDQGLADRGV PLDSYVLCMI FQKEGLGPRI  360
GAQYGAPFKE EDWSDDEVEI TSEAVQVAIT PEPDLGLPCN YVSPTATNAH SVGDIGVGPS  420
GSGIYDILPP FCEVSQPVSS NYVTLEMPLA SVGDDIISMF DCFTEESALY TDGPKKVEVE  480
GRLETVQNAN MPSTHSPEVI GVGPSFESCG FDVLPPCNVN KSFVTMENPP ASNGDETLPI  540
MDCFAEESVF LVNDNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	7e-63	NAC family protein