PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g476400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 259aa    MW: 28892.8 Da    PI: 4.8002
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g476400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.51.9e-1289164281
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       +Y++Y+++ GF v k++s++  ++g+ +  t  C +egk+++++++     ++r++ + +Cka+++ ++  +gkw+v+++
  Pd.00g476400.m01  89 YYKQYGRQSGFPVIKRSSTNG-DDGNLKYVTISCAREGKSKSKSSN---FLKPRPSIKNDCKAQFRASLLLNGKWKVNSI 164
                       8************99987776.9999***************99888...999*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MGTRVSASES EDTSHINNNS PIDQGMEESS ARLENNQHDD AVEMNFNGIE KENNGDETEN  60
NDNVMSVEEK VQDPQVGMIF DSIDEVITYY KQYGRQSGFP VIKRSSTNGD DGNLKYVTIS  120
CAREGKSKSK SSNFLKPRPS IKNDCKAQFR ASLLLNGKWK VNSIPAQSDV FCHTDAPPIC  180
ESDNLVGTQE SNNVVMLLGL THGGHPDQLY KRPLTGNITY PTIHENYFQG DQYQNWNGGS  240
GLYNLALVQE EMITKNSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-09FAR1 family protein