PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g477420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 285aa    MW: 31562.1 Da    PI: 4.5415
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g477420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.16.3e-181461149
               NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                      + pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLpk
  Pd.00g477420.m01 14 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLPK 61
                      579***************************.89**************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDEKNDMDKI DDVMLPGFRF HPTDEELVGF YLRRKIQQRL LPIELIKQVD IYKYDPWDLP  60
KSAPPPKKLL DKSLPANDAW AICRIFKKTN SMAQRALSHS WGSPFQEPTA ASGLLNQGAH  120
CTQFSSENMS CTTDIGSSIQ FWSNNDLQQA SNASYSAFDT LPYKPINPTG SKPSIFDADQ  180
FPNGFMFSPG EMSGPISPAL IGDLSNTTGS IDFDGSQQQQ FSGFSINLSQ NQMQGNMETG  240
ENEGGFRKNL SSSTNDDAWK PTLPSDSPPC PSDMSTSYST NKCYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.16e-24NAC family protein