PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g479290.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 245aa    MW: 27224.7 Da    PI: 6.1348
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g479290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.8e-1079116139
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 
                       +g WT++Ed llv++v ++G + W+ Ia+++  gR +kq
  Pd.00g479290.m01  79 KGQWTPQEDRLLVQLVGRFGIKKWSQIAKMLS-GRVGKQ 116
                       799*****************************.998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGPQSCIQLP PLINFGELGS SSAMAISLPS DEVTCNSSSS TEIEFCKRLS ADDQKKTKRL  60
CMRRPTSSKV LQKKPSIIKG QWTPQEDRLL VQLVGRFGIK KWSQIAKMLS GRVGKQSSTE  120
TTETTEQRNA LSSDHSRGFY FNQNNAESAN WALTAYHPDH ISNETSNNMY SQMGGSVSNL  180
FNFESYGFGG SFLVDQVTGV EEYRGNSMEA EMPLALEVKS LMQGPDDDHV KKEMDLLEMI  240
CQGKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.11e-19MYB family protein