PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g479810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 1037aa MW: 117298 Da PI: 5.8887

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g479810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.3	5.7e-31	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 lp+G++F+P+d el+ e+L++k+ + + ++e+i+++d iy+ +P +Lp k++ ++ +fF+k+ ++yatg+rk+r+ Pd.00g479810.m01 55 LPAGVKFDPSDAELL-EHLAAKCGVGNskphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAYATGHRKRRKvdchrsla 145 799**********.999999876664555444456777766677******.556778899**************868888888 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++ +W++tgk+k++++ +g ++g+kk++v+y +++ +k+ k++Wvmh+y+l Pd.00g479810.m01 146 AEHVRWHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGSKADKSNWVMHQYHL 197 77999********.999*******4334667888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1037 aa Download sequence
MARAWLINSR GLANKVKNAA RSSAYQIKDC GANRDCPNCH FVIDNSDVLS EWPGLPAGVK 60 FDPSDAELLE HLAAKCGVGN SKPHMFIDEF IPTLDGDNGI YYDHPANLPG SKNDGSSFHF 120 FHKTINAYAT GHRKRRKVDC HRSLAAEHVR WHKTGKTKPI MENGVQKGCK KIMVLYKSSK 180 KGSKADKSNW VMHQYHLGTE DGEKEGEYVV SKIFYQQHKQ SETNDNNLVI EDDVNALGTS 240 PRTPITSAPN PPRPGKSVGC DDVPDEDVLH SSAKEAELVP GTQFEDNAVD TTWLAGESQA 300 DENCDLDCLE DTLLCKETFD SSTLLNGSFV DRISSTDFPS NIYGVTGNSS TSCGIGDLEN 360 IDLGTPPDFQ LADLQFGSQD SLLGWLDRNV FLLRDVSAKL LSSNVVQPSK PSEDCFFSSS 420 TPSNPFDGWC RSMSTSRGSS SRGSSMRSKV AKRMQKESGK TLREVRRAKK LQKKLMTENE 480 RLIYNLKRAK RKVALLLQKL KKYELPDLPA PRHDPELLTL EQLQAFKKIG FRNKNYVPVG 540 VRGVFGGVVQ NMHLHWKFHE TVQVCCDNFP KEKIKEMATM LARLSGGVVI NIHNVKTIIM 600 FRGRNYRQPK NLIPFNTLTK RKALFKARFE QALESQKLNI KKIEQELRRS GVNPEDPVAI 660 ASIQRVASSF FNAIDQKDGS PYVFHGDKLS AAEPDNKLKH SDPPDEEEEE ELDKFIAEIE 720 DAAEREWAAE EAAEKEEQTR LRYWNKEQFG GRYRRSEDVE NDDSDDETTR ARGWRDTHGK 780 QRPNDSDYED DEEESDSSNV VDASVLDSDA DDSDGKPEKF KVSTRDRAKQ DKFGRAKNDE 840 RFKKNHEVNN TKASSRKIIV DEGTESENML SDLDTVMWKS DSEEEHDSTA SRAVNYDFRS 900 SGDEEEDLSY RRVERKKLAN DLDKGHDKFE VSRNAQGKHH RICRADNNDY LKRNGDVNVR 960 RKLVEEDVVS ENTFGASESA IWELEAVEDV GAPTAGRYNY KSSDEEDYQV RRVEKKVKDT 1020 NKSTRTTKEL DEDWDSD

Sequence ? help Back to Top

Protein Sequence Length: 1037 aa Download sequence

MARAWLINSR GLANKVKNAA RSSAYQIKDC GANRDCPNCH FVIDNSDVLS EWPGLPAGVK  60
FDPSDAELLE HLAAKCGVGN SKPHMFIDEF IPTLDGDNGI YYDHPANLPG SKNDGSSFHF  120
FHKTINAYAT GHRKRRKVDC HRSLAAEHVR WHKTGKTKPI MENGVQKGCK KIMVLYKSSK  180
KGSKADKSNW VMHQYHLGTE DGEKEGEYVV SKIFYQQHKQ SETNDNNLVI EDDVNALGTS  240
PRTPITSAPN PPRPGKSVGC DDVPDEDVLH SSAKEAELVP GTQFEDNAVD TTWLAGESQA  300
DENCDLDCLE DTLLCKETFD SSTLLNGSFV DRISSTDFPS NIYGVTGNSS TSCGIGDLEN  360
IDLGTPPDFQ LADLQFGSQD SLLGWLDRNV FLLRDVSAKL LSSNVVQPSK PSEDCFFSSS  420
TPSNPFDGWC RSMSTSRGSS SRGSSMRSKV AKRMQKESGK TLREVRRAKK LQKKLMTENE  480
RLIYNLKRAK RKVALLLQKL KKYELPDLPA PRHDPELLTL EQLQAFKKIG FRNKNYVPVG  540
VRGVFGGVVQ NMHLHWKFHE TVQVCCDNFP KEKIKEMATM LARLSGGVVI NIHNVKTIIM  600
FRGRNYRQPK NLIPFNTLTK RKALFKARFE QALESQKLNI KKIEQELRRS GVNPEDPVAI  660
ASIQRVASSF FNAIDQKDGS PYVFHGDKLS AAEPDNKLKH SDPPDEEEEE ELDKFIAEIE  720
DAAEREWAAE EAAEKEEQTR LRYWNKEQFG GRYRRSEDVE NDDSDDETTR ARGWRDTHGK  780
QRPNDSDYED DEEESDSSNV VDASVLDSDA DDSDGKPEKF KVSTRDRAKQ DKFGRAKNDE  840
RFKKNHEVNN TKASSRKIIV DEGTESENML SDLDTVMWKS DSEEEHDSTA SRAVNYDFRS  900
SGDEEEDLSY RRVERKKLAN DLDKGHDKFE VSRNAQGKHH RICRADNNDY LKRNGDVNVR  960
RKLVEEDVVS ENTFGASESA IWELEAVEDV GAPTAGRYNY KSSDEEDYQV RRVEKKVKDT  1020
NKSTRTTKEL DEDWDSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	3e-88	NAC family protein