PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g480210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 600aa MW: 68406.5 Da PI: 8.6643

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g480210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.8	7.8e-23	277	363	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA GFs+rk+ +ks+ ng +++r+++C+++g+r ++++ + r++r+etrtgC a++++ ++ +gk++vt++e +HnHe++ Pd.00g480210.m01 277 CYSRYAVLEGFSIRKDFVNKSRINGIVVSRRYTCYRQGYRPIQHNA--NVRKSRQETRTGCLAHMTIARQPNGKFCVTHFEPKHNHEFV 363 7***************************************9988..9999********************************986 PP
2	FAR1	92.2	6.8e-29	411	499	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk++ ++sk ng++++r+f+C +eg+r+++k++ + +r+r+etr+gC a+l+++++ d++++vt++e++HnHel+ Pd.00g480210.m01 411 EFYNTYAGRVGFSVRKDYVNRSKINGSVVSRRFTCFREGFRQRDKRD-MNVKRPRKETRIGCLAQLVISRQPDDRYRVTHFEEKHNHELV 499 6*****************************************999.99************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MKREGRQHGM VRTYRVLPDP LNPRPETRHV NRFDSPPTAG LFTKVTTKPT NHSKFTGKCG 60 KPRCTECHIH PASKAKDKTK GNHKLKSSDV LSNHRLVTWP VVDSRPSSNF SGWMGCSEPD 120 ISSHPQEESD YNELPTSFRL DIDVQRDCGS SKDSCAERSQ AVIDHEHDSP RECQSPKGSS 180 FEKRLVVIDT EQEYQSPIPS SIDKNQVEID CEECETPKFY SVSKFEMDVD GELELQSPNV 240 PCADVPGAGM GMKGEEYIYV VPQIGVEFES EDHAYNCYSR YAVLEGFSIR KDFVNKSRIN 300 GIVVSRRYTC YRQGYRPIQH NANVRKSRQE TRTGCLAHMT IARQPNGKFC VTHFEPKHNH 360 EFVAPCTTYL LPSQKRLNFA QAVEADLGDK SGIDGVPKLG MGFDSEDHAY EFYNTYAGRV 420 GFSVRKDYVN RSKINGSVVS RRFTCFREGF RQRDKRDMNV KRPRKETRIG CLAQLVISRQ 480 PDDRYRVTHF EEKHNHELVA ACRVHMLRSQ KRLIAAQVFE GDLVDCSNLQ PESASELILV 540 FFIMRMRRIS LMLGRGGVKT LGSEIMDGSH LGHCIGRHLH CCFYRRKSLS ICLKLSLGRY

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MKREGRQHGM VRTYRVLPDP LNPRPETRHV NRFDSPPTAG LFTKVTTKPT NHSKFTGKCG  60
KPRCTECHIH PASKAKDKTK GNHKLKSSDV LSNHRLVTWP VVDSRPSSNF SGWMGCSEPD  120
ISSHPQEESD YNELPTSFRL DIDVQRDCGS SKDSCAERSQ AVIDHEHDSP RECQSPKGSS  180
FEKRLVVIDT EQEYQSPIPS SIDKNQVEID CEECETPKFY SVSKFEMDVD GELELQSPNV  240
PCADVPGAGM GMKGEEYIYV VPQIGVEFES EDHAYNCYSR YAVLEGFSIR KDFVNKSRIN  300
GIVVSRRYTC YRQGYRPIQH NANVRKSRQE TRTGCLAHMT IARQPNGKFC VTHFEPKHNH  360
EFVAPCTTYL LPSQKRLNFA QAVEADLGDK SGIDGVPKLG MGFDSEDHAY EFYNTYAGRV  420
GFSVRKDYVN RSKINGSVVS RRFTCFREGF RQRDKRDMNV KRPRKETRIG CLAQLVISRQ  480
PDDRYRVTHF EEKHNHELVA ACRVHMLRSQ KRLIAAQVFE GDLVDCSNLQ PESASELILV  540
FFIMRMRRIS LMLGRGGVKT LGSEIMDGSH LGHCIGRHLH CCFYRRKSLS ICLKLSLGRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	4e-28	FAR1 family protein