PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g482830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 202aa    MW: 22480.5 Da    PI: 9.3922
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g482830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like673.2e-21122175155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       k+r +W + L e+F+ a++++ G ++AtPk+ile+m+ ++Lt+++v+SHLQkYR+
  Pd.00g482830.m01 122 KKRCEWKKSLGEKFMLAITHI-GLDNATPKRILEFMNEPDLTIKNVASHLQKYRI 175
                       689******************.********************************7 PP
2Myb_DNA-binding23.81e-07124174148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W + + e++  a++  G +  t+k+I + m+   +t k++ s++qky+
  Pd.00g482830.m01 124 RCEWKKSLGEKFMLAITHIGLDnaTPKRILEFMNePDLTIKNVASHLQKYR 174
                       56899*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MSASIALLKS GGLNESDPSS ALPQHLPSTY ADRIQGWEGG HARFYGGADA FASGAIGGGF  60
GNGNWDSQGY GFSGRSCYEL KCDSGPIWCL TGDEEKQEKR AKRGRKRSRE GDDEERTAAP  120
RKKRCEWKKS LGEKFMLAIT HIGLDNATPK RILEFMNEPD LTIKNVASHL QKYRIYLKQL  180
KVGVAGDEDM RERLRRLILI IT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105124RKRSREGDDEERTAAPRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.17e-21ARR-B family protein