PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g490760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 111aa    MW: 12328.9 Da    PI: 5.7564
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g490760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB153.92.8e-4823111189
             NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                       ++eqd++lPianv+rimk++lPanakisk+aket+qecvsefisfvtseas+kc++e+rkt+ngdd+ wal+ lGf+dy  pl+ +l++
  Pd.00g490760.m01  23 MKEQDQLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDVSWALGALGFDDYTGPLRRFLHR 111
                       589************************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MVDNNNNIGA SGAANHDEDG AMMKEQDQLL PIANVGRIMK QILPANAKIS KEAKETMQEC  60
VSEFISFVTS EASEKCRKER RKTVNGDDVS WALGALGFDD YTGPLRRFLH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.15e-53NF-YB family protein