PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g492890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 240aa    MW: 27145.6 Da    PI: 8.0591
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g492890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.1e-1759110155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  + +Wv+e r+p++   + r++lg++ tae+Aa+a++ a+++++g
  Pd.00g492890.m01  59 PVYRGVRRRN-NDKWVCEMREPKKT--KSRIWLGTYPTAEMAARAHDVAALAFRG 110
                       68*****887.8*********9654..4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MNRFLSHFSD SVDQPESSSL SDASVTTLRA SWSDEDVILA SSRPKKRAGR RVFKETRHPV  60
YRGVRRRNND KWVCEMREPK KTKSRIWLGT YPTAEMAARA HDVAALAFRG KLTCLNFADS  120
AWRLPVPASM DAVDIRRAAA EAAEGFRPAE FGGVYSSSSS DEKERMVVQV EEKKKKGSVN  180
MERSRSVRLS YWDEEEVFDM PRLLDDMAQG LLLSPPQCLG GDIWDDMGTD ADVKLWSFSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.16e-59ERF family protein