PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g492960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 231aa    MW: 25907.2 Da    PI: 5.0297
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g492960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-1859110155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  +++Wv+e+r+p   + k+ r++lg++ tae+Aa+a++ a+++++g
  Pd.00g492960.m01  59 PVYRGVRRRN-NNKWVCELREP---NkKKSRIWLGTYPTAEMAARAHDVAALAFRG 110
                       68*****887.8******9998...5477************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MDMFNAQLSN SPDQPESSSF SDASVTTLPA SSSDENVILA SSRPKKRAGR RVFKETRHPV  60
YRGVRRRNNN KWVCELREPN KKKSRIWLGT YPTAEMAARA HDVAALAFRG KLACINFADS  120
AWRLPLPASM DTMDIRRAAA EAAEGFRPAE FGGLSSDSSD EKEKIFSVDM EKSSSSLCLF  180
YLDEEEMFDM PRLIDNMAQG LLLAPPQCSD GYLNWDDMET EADAKLWSFS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.15e-63ERF family protein