PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g494630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 719aa MW: 80356 Da PI: 6.6798

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g494630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.7	5.9e-20	574	670	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++ +W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ + Pd.00g494630.m01 574 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISIPMEDiGTSHVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvK 663 79***********************999999****7777*****777777777777.******************..5558 PP EE..EEE CS B3 89 efelvvk 95 + +++++ Pd.00g494630.m01 664 CNKYMIR 670 8877766 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS 60 STPAPVKSVT SSSTSSSVSS SSSAASWAIL RSDAEEDGER RQQHHHNSYN HRHQYSQADD 120 QAVDAHALSS TASMEISQPS DLGREGGAMD CMGAMETFGY MDLFESNEFF DPSSIFQIRD 180 EENNKKDDQK ENKEPDDMAM VFLEWLRSNR ETVSAEDLRS VKIKKSTIEC AARRLGGGKE 240 AMKQLLKLVL EWVQTNHLQK RRSNSLTTKD ADIVAQQQQY QDPFQNPNPN TSPRVLESNP 300 SCSFTQTPWM APPPHSAYDH AGGILVPTQP PPPPPAAYPS MMGYIAPDQY VNGPGPYQPS 360 PEYHHMIDSG QPTWPSSPFG MGTAHYGSFP DNNIHLAPPP QHHPQAFAGY GSQYQPYQYF 420 PLNGEHQMMR LGSSATKEAR KKRMARQRRL VSHHRHGHQQ QHHLNVQMPD HLLHQQHTRL 480 VGNAADLNCA NSVPLQANPG NWFYWPTATA APSPSPAMMP SITQEAAPPP PVQQMDRPAS 540 TQAQNYNQGR SAAQERQERR QGWKSEKNLK FLLQKVLKQS DVGSLGRIVL PKKEAETHLP 600 ELEARDGISI PMEDIGTSHV WNMRYRYWPN NKSRMYLLEN TGDFVRANGL QEGDFIVIYS 660 DVKCNKYMIR GVKVRQAGPK SEGNKRPGKS QRNQHANTPA GTNGSSPSSV STSATHKKQ

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS  60
STPAPVKSVT SSSTSSSVSS SSSAASWAIL RSDAEEDGER RQQHHHNSYN HRHQYSQADD  120
QAVDAHALSS TASMEISQPS DLGREGGAMD CMGAMETFGY MDLFESNEFF DPSSIFQIRD  180
EENNKKDDQK ENKEPDDMAM VFLEWLRSNR ETVSAEDLRS VKIKKSTIEC AARRLGGGKE  240
AMKQLLKLVL EWVQTNHLQK RRSNSLTTKD ADIVAQQQQY QDPFQNPNPN TSPRVLESNP  300
SCSFTQTPWM APPPHSAYDH AGGILVPTQP PPPPPAAYPS MMGYIAPDQY VNGPGPYQPS  360
PEYHHMIDSG QPTWPSSPFG MGTAHYGSFP DNNIHLAPPP QHHPQAFAGY GSQYQPYQYF  420
PLNGEHQMMR LGSSATKEAR KKRMARQRRL VSHHRHGHQQ QHHLNVQMPD HLLHQQHTRL  480
VGNAADLNCA NSVPLQANPG NWFYWPTATA APSPSPAMMP SITQEAAPPP PVQQMDRPAS  540
TQAQNYNQGR SAAQERQERR QGWKSEKNLK FLLQKVLKQS DVGSLGRIVL PKKEAETHLP  600
ELEARDGISI PMEDIGTSHV WNMRYRYWPN NKSRMYLLEN TGDFVRANGL QEGDFIVIYS  660
DVKCNKYMIR GVKVRQAGPK SEGNKRPGKS QRNQHANTPA GTNGSSPSSV STSATHKKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-135	B3 family protein