PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g495920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 571aa MW: 62344.5 Da PI: 6.8578

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g495920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.8e-09	385	432	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g495920.m01 385 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 432 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSLEQ SPDRFYNPNW 60 DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGTSGE ISPHSQSLLG 120 IQANTYMGRN GNGNASTNTS CYSTPLNSPP KLSLPIMDHH LKKEKLPNMG KPMPLNSSVA 180 EFSADPGFAE RAAKFSCFGS RSFNGRTTQL GMNNNNSSSN NNTELPYRSN AIMGNGKLPR 240 VSSSPALKAL GSQTGLQEKM NSLLQDRNEL PISREESTLS EQNPNGETGL AASNSMDLNS 300 RKRKSVSKGK AKEPPPISSP SPIATKRTKP NENNGNDQNG SVKAEEDTKG STSSDEKQTM 360 TGPKPPEPPK DYIHVRARRG QATDSHSLAE RVRREKISER MKLLQDLVPG CNKVTGKALM 420 LDEIINYVQS LQRQVEFLSM KLASVNTRLD FNVDALMSKE IFQQNNSLPQ HPIFPLDSSA 480 QAIYGHQRQQ NPALQNNISN GAVDPLDTSL CQSLGMQLPP LSGFNSEGIP QFPAFGEDDL 540 QTIVQMGYGQ NPNRETELDG SNQVSHMKIE L

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MENEFFLNAG IPPPLHFEQT SSMPAWRSSF STAMDIQATA TADRNCSLEQ SPDRFYNPNW  60
DKSADQNIHF ESALSSMVSS PAASNSNISN ESFVIRELIG KLGNIGTSGE ISPHSQSLLG  120
IQANTYMGRN GNGNASTNTS CYSTPLNSPP KLSLPIMDHH LKKEKLPNMG KPMPLNSSVA  180
EFSADPGFAE RAAKFSCFGS RSFNGRTTQL GMNNNNSSSN NNTELPYRSN AIMGNGKLPR  240
VSSSPALKAL GSQTGLQEKM NSLLQDRNEL PISREESTLS EQNPNGETGL AASNSMDLNS  300
RKRKSVSKGK AKEPPPISSP SPIATKRTKP NENNGNDQNG SVKAEEDTKG STSSDEKQTM  360
TGPKPPEPPK DYIHVRARRG QATDSHSLAE RVRREKISER MKLLQDLVPG CNKVTGKALM  420
LDEIINYVQS LQRQVEFLSM KLASVNTRLD FNVDALMSKE IFQQNNSLPQ HPIFPLDSSA  480
QAIYGHQRQQ NPALQNNISN GAVDPLDTSL CQSLGMQLPP LSGFNSEGIP QFPAFGEDDL  540
QTIVQMGYGQ NPNRETELDG SNQVSHMKIE L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	300	305	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-113	bHLH family protein