PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g496500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 277aa    MW: 31980.1 Da    PI: 5.4642
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g496500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1821e-25102192190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY +Y+++ GF+vr++++++s++n+ ++ ++fvCs+eg+r+++    +++   + ++tr gC a+l+v +++ +kw+vtk+++eHnH+l+
  Pd.00g496500.m01 102 DFYIAYGRHSGFTVRIHHNRRSRMNNMVIGQDFVCSREGFRDKKYVCrEDRVLPPPPVTREGCAAMLRVALRDGEKWVVTKFVKEHNHTLM 192
                       6*****************************************998772333344899*******************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MSELLCDECR GCVNYSVVQG AMESKANNIS FNSDESERCL EFESCDEHLL IDDDDELPKD  60
TDLCSLEVDK IIQQPNASLP LMGNAVEPYI GMGFKSRDDA RDFYIAYGRH SGFTVRIHHN  120
RRSRMNNMVI GQDFVCSREG FRDKKYVCRE DRVLPPPPVT REGCAAMLRV ALRDGEKWVV  180
TKFVKEHNHT LMAASKVPWR GFGKNLISED EKDQKIRDLT IELSNERQRC KRRCAAYQEQ  240
ISMLLKDIQE HSDHLSTRVQ DIVRNIRELE NEQCVDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227232RQRCKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-42FAR1 family protein