PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g496510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 209aa    MW: 24122.4 Da    PI: 5.2393
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g496510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.86.6e-2742130189
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +fY+eYA++vGF +r+++ ++s+ +++i +r++ C+k+g+  + +++ +  rr+r++tr gCka++ vk +k+gkw+vt+++++H+H+l
  Pd.00g496510.m01  42 DFYSEYARHVGFIMRIDQCRRSDVDKRILSRRLSCNKQGRYVKPRDQVRPVRRPRPSTREGCKAMMLVKVNKSGKWVVTRVVKDHTHPL 130
                       6***************************************999999999**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MWVMRSEGGS SGAPETSAER DLNAVAEPYV GMEFDSEDAA KDFYSEYARH VGFIMRIDQC  60
RRSDVDKRIL SRRLSCNKQG RYVKPRDQVR PVRRPRPSTR EGCKAMMLVK VNKSGKWVVT  120
RVVKDHTHPL IVSSGISMDE RDMKIEQLTM ELEREDQLCE LYHGLLLTLL DNVEEQTELI  180
SMKVSGIVND VREFETEVER LPQNELDDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.14e-50FAR1 family protein