PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g496530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 175aa    MW: 19869.8 Da    PI: 10.2125
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g496530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR197.71.3e-3068155290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkkek+gkw vt++++eHnH+l+
  Pd.00g496530.m01  68 FYDAYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKEHNHPLV 155
                       9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MIIDGRGLSK LLGQDLSLKT MDEQSSMSKD EDVIESSNGK DAVTSEGNSD MEPYVGMEFE  60
SEEAAKVFYD AYATHLGFIM RVDAFRRSMR DGKVVWRRLV CNKEGFRKTR PKRSENRKPR  120
AITREGCKAM IVVKKEKSGK WIVTRFVKEH NHPLVVTPAN GRRTVLLSQT PVSTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-65FAR1 family protein