PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g501180.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 225aa MW: 24755.8 Da PI: 8.6768

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g501180.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.8	2e-34	57	178	3	105
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....... 88 k ++ ++hTkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+ a+ +i ++tgt++ +a+ ++++ +s++ +s + Pd.00g501180.m02 57 RKSASSRDRHTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRHAESSIVAATGTGTLPAEPISTSAPAVSSQVPSLAcrahpls 149 5778999********************************************************888886664444444444333334555566 PP TCP 89 ............kaaksaakskksqksaa 105 +++ +a++++++++++ Pd.00g501180.m02 150 alngggqfmyplLSSAHQAQPNQPHQQPS 178 66777777777633333334444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MGSEMALAPL RNHEDPTLIP TAVLSSAALE TASSRQHSQQ SIQSLQPKTH NQLSQTRKSA 60 SSRDRHTKVN GRGRRVRMPA MCAARIFQLT RELGHRSDGE TIEWLLRHAE SSIVAATGTG 120 TLPAEPISTS APAVSSQVPS LACRAHPLSA LNGGGQFMYP LLSSAHQAQP NQPHQQPSIR 180 LDLCQPAGLD YTDLDEHWKS KNMRSEQVLN HESTWFKQQQ EEKCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-34	TCP family protein