PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g502200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 231aa    MW: 26345.7 Da    PI: 9.2742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g502200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99.2e-12108149351
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                        +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Pd.00g502200.m01 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 149
                       79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVSLRRRRLL GLCSGVSPVL DPLPRLCDNG TVPQNFTWTN PVSVHPMPSN DANQPDGNAS  60
VKGEARSPTA SGSSLSKEQH DQQVAGPPIK RRKRHRRKHF QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA ARLYDRAAFM CGREPNFELS EEEKQELRKF KWDEFLAMTR  180
HAITNKKHRR RPGAESHKRS ETPLENGDWD DKEEVDSLSA SEDMEQDMLG S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.19e-48ERF family protein