PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g504210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARF

Protein Properties

Length: 693aa MW: 76374.5 Da PI: 6.8138

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g504210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.3	1.4e-23	117	218	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + Pd.00g504210.m01 117 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--R 205 89**************************996555555..89*******************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ l+v+++r+ Pd.00g504210.m01 206 AENGDLCVGIRRA 218 488999**997 PP
2	Auxin_resp	114.3	1.1e-37	282	365	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa as++++FevvY+Prast+eF+vk++ v++al++++++GmRfkmafetedss++++ +Gt+++v+ ++p+rWp+S+Wr+L+ Pd.00g504210.m01 282 AAALASKGQPFEVVYYPRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWfMGTISSVQVAEPLRWPESPWRLLQ 365 67889*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MDSREKLKEG EKCLDPQLWH ACAGGMVQMP PVNAKVFYFP QGHAEHACGP VDFRNCPRVP 60 PYIFCRVSAI KFMADPETDE VYAKIRLVPL SASEAGYEDD GIGGLNGSET PDKPASFAKT 120 LTQSDANNGG GFSVPRYCAE TIFPRLDYSA DPPVQTILAK DVHGETWKFR HIYRGTPRRH 180 LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKR GIGGGPESSS GWNPTGGNCT 240 MPYGGYSAFL REDENKLMRN GSNSNGSLMG KGKFGPESVF EAAALASKGQ PFEVVYYPRA 300 STPEFCVKAS LVKAALQIRW CPGMRFKMAF ETEDSSRISW FMGTISSVQV AEPLRWPESP 360 WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLTPFS PPRKKMRLPQ HPDFPFEGQL 420 PMPTFSGNLL GPSSPFGCLP DKTPAGMQGA RHGHYGLSLS DMHLNKLQTG LFPAGFTPLD 480 HAATATKFSN NTMTQKPTMS ENVSCLLTMA HSTQTSKKPD DVKPPQLVLF GQPILTEQQI 540 SLSCSGDTVS PVLTGNSSSD GNAEKTANLS DNSVSALHQQ SLQERSYCEG FQWYKDTRHE 600 TEPSLETGHC KVFMESEDVG RTLDLSVFGS YDELYRKLAD MFGIENSETL NHVLYRDATG 660 AVKHIGDEPL SDFMKTARRL TILMDSGSNN VVM

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MDSREKLKEG EKCLDPQLWH ACAGGMVQMP PVNAKVFYFP QGHAEHACGP VDFRNCPRVP  60
PYIFCRVSAI KFMADPETDE VYAKIRLVPL SASEAGYEDD GIGGLNGSET PDKPASFAKT  120
LTQSDANNGG GFSVPRYCAE TIFPRLDYSA DPPVQTILAK DVHGETWKFR HIYRGTPRRH  180
LLTTGWSTFV NHKKLVAGDS IVFLRAENGD LCVGIRRAKR GIGGGPESSS GWNPTGGNCT  240
MPYGGYSAFL REDENKLMRN GSNSNGSLMG KGKFGPESVF EAAALASKGQ PFEVVYYPRA  300
STPEFCVKAS LVKAALQIRW CPGMRFKMAF ETEDSSRISW FMGTISSVQV AEPLRWPESP  360
WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLTPFS PPRKKMRLPQ HPDFPFEGQL  420
PMPTFSGNLL GPSSPFGCLP DKTPAGMQGA RHGHYGLSLS DMHLNKLQTG LFPAGFTPLD  480
HAATATKFSN NTMTQKPTMS ENVSCLLTMA HSTQTSKKPD DVKPPQLVLF GQPILTEQQI  540
SLSCSGDTVS PVLTGNSSSD GNAEKTANLS DNSVSALHQQ SLQERSYCEG FQWYKDTRHE  600
TEPSLETGHC KVFMESEDVG RTLDLSVFGS YDELYRKLAD MFGIENSETL NHVLYRDATG  660
AVKHIGDEPL SDFMKTARRL TILMDSGSNN VVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein