PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g506620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 320aa    MW: 36537.5 Da    PI: 4.3147
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g506620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.22.3e-1771432128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 
                       p GfrF+P+dee+v  +L + + ++k  ++l +  ++ +++  +++eP+++ kk+ +    ++++yf sk +k ++ ++  +r+ + g+W++t
  Pd.00g506620.m01   7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfFHACNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSET 98 
                       89******************97776658555444489999733589*****8544433224557777777766554.5566668999****** PP

               NAM  87 gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++k v +k     + + +g k+ + + +  + +  +t W+++ey+l
  Pd.00g506620.m01  99 ESSKLVREKlsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143
                       ******999877776677********984..334469********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEESLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK  60
YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVREKLSG NPNPNPIGRK  120
RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGNKATNLKR  180
CSSSPIGGDL VGFDPIDLTI FEENTMADME KLLGEDWSPS NFENEENKMA SMEQLLGEAW  240
SPSNFEDAVS YDVDPIGETQ INFENEENTM ANTEQLLGEA WSPSNFENVV SHDVDPIGET  300
QSSQLSNWSQ AILDQLLVGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.12e-09NAC family protein