PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g507930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 382aa MW: 42530.9 Da PI: 5.719

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g507930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd++l+++++ G g+W++ ++ g+ R++k+c++rw +yl Pd.00g507930.m01 14 KGRWTAEEDQILINYIQTNGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	49.5	9.8e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+++++++++ lG++ W++Ia+ ++ gRt++++k++w+++l Pd.00g507930.m01 67 RGNISAQEEDIIIKLHASLGNR-WSLIASQLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGRAPCCDKI GLKKGRWTAE EDQILINYIQ TNGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SAQEEDIIIK LHASLGNRWS LIASQLPGRT DNEIKNYWNS HLSRKIDTFR 120 RPTTTSDQMS SLPTAASNNI PSKRRGGRTS RWAMKKSKTY TTTNSTNYTQ RHNKGQKEIT 180 NIAADDDEAI ALEKKTSLPG PNDNIDTMHH DYMCQKESQE MLLGPHPHND KNKDDDLDES 240 GGIEFDGGLL GTFNELMDNV ELLQKDPNSN GVLTLSDHDH AMGVTYEVDQ VETTTTCGHL 300 SSSSNGQVCF SSIMSMTATS SSSALASAAA GSYYFDMEDG QAATAANGND RDHNNHILWD 360 WESVVEAGHE LWDHDDKENM LS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGRAPCCDKI GLKKGRWTAE EDQILINYIQ TNGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI SAQEEDIIIK LHASLGNRWS LIASQLPGRT DNEIKNYWNS HLSRKIDTFR  120
RPTTTSDQMS SLPTAASNNI PSKRRGGRTS RWAMKKSKTY TTTNSTNYTQ RHNKGQKEIT  180
NIAADDDEAI ALEKKTSLPG PNDNIDTMHH DYMCQKESQE MLLGPHPHND KNKDDDLDES  240
GGIEFDGGLL GTFNELMDNV ELLQKDPNSN GVLTLSDHDH AMGVTYEVDQ VETTTTCGHL  300
SSSSNGQVCF SSIMSMTATS SSSALASAAA GSYYFDMEDG QAATAANGND RDHNNHILWD  360
WESVVEAGHE LWDHDDKENM LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	3e-78	MYB family protein