PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g508310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 184aa    MW: 20729.1 Da    PI: 4.8137
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g508310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.2e-303795259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+ +Hnh+
  Pd.00g508310.m01 37 SDSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTCSHNHP 95
                      69************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MDETLSPEPD SEVPKELRPE VKIGTNVGKL KNEGPPSDSW SWRKYGQKPI KGSPYPRGYY  60
RCSTSKGCSA KKQVERSKTD ASVLIITYTC SHNHPGPDSP IRSSQNIMID QEEDPFLEKT  120
HVSSTLGFLL DEEPLSYSQL MSFSTPKSEE NDFFDELEEL PTFSSFPSFM RSNLSLERIP  180
SVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-34WRKY family protein