PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g510710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 218aa    MW: 24689.4 Da    PI: 8.9778
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g510710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.13.7e-33139197159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H+h+
  Pd.00g510710.m01 139 LDDGYRWRKYGQKAVKNNKFPRSYYRCTFQGCNVKKQVQRLTKDEGIVVTTYEGMHTHP 197
                       59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MFFPCSSSTS AANYDPMIPI SATNNLTTDD HHMGMGGSQV YNYFDGRDQS SNGLLGLRSS  60
AGNQVGREVL INKDHHQYLQ QQYSDLTTTA SANININNVV VGADQNPDEA TNSGNKNKGE  120
KKTRKPKYAF QTRSQVDILD DGYRWRKYGQ KAVKNNKFPR SYYRCTFQGC NVKKQVQRLT  180
KDEGIVVTTY EGMHTHPIEK PSDNFEHILN QMQIYTPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.13e-57WRKY family protein