PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g512580.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 154aa    MW: 17766 Da    PI: 8.4719
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g512580.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.9e-182669146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg+ T+eE++l+ ++++++G++ W++Ia++++ gRt++++k++w++
  Pd.00g512580.m02 26 RGNITPEEQLLIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 69
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MSLGLKRTGK SCRLRWLNYL RPDVRRGNIT PEEQLLIMEL HAKWGNRWSK IAKHLPGRTD  60
NEIKNYWRTR IQKHIKQAEN NITPGQNFEV NDQASTSQVS ISSAAVDTME ITHPAPANYP  120
PNMDAYPSSL PADHSHENYW SIEDLWSMQL LNGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.16e-63MYB family protein