PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g516660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 399aa MW: 46555.8 Da PI: 9.5534

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g516660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.1	1.7e-19	62	138	9	90
FAR1 9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++++++ ++++w++ ++eleHnH+++ Pd.00g516660.m01 62 RKGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVVIRLVDSKRWRIVEVELEHNHQVS 138 67**********9999************99888.....9********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MGPAEVVAPI GELWHHVLRE DPLWPGLFVF CWDRATSLPA SPIRPGKSLW KKFVSIVSQY 60 LRKGFGIRVS NSWFRSKRKE RYRAKLSCSS AGFKKKSEAN NPRPETRTGC PAMVVIRLVD 120 SKRWRIVEVE LEHNHQVSPQ IKRFYKSHKK MILAAKSAQP LPEPVTEIHT IKLYRTPVMD 180 VGSNGYSNFT ESEALHRKRM KEVVADLESR SSSFELKTKC NFEVQLCKVY TKEIFKRFQL 240 EVEGMYSCFN TRQVSVNGPI ITYIVKERVE VEGKEKEVRC YEVLYETTQV DIRCICSLFN 300 YKGYLCRHAL NVLNYNGVEE VPSRYILPRW RKDFKCRYLL HHGSSNIDVY NPVYWHNHLY 360 KLALPVAEEG AQSEEHYKTT LQALEELLNK FHLVEDTLV

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MGPAEVVAPI GELWHHVLRE DPLWPGLFVF CWDRATSLPA SPIRPGKSLW KKFVSIVSQY  60
LRKGFGIRVS NSWFRSKRKE RYRAKLSCSS AGFKKKSEAN NPRPETRTGC PAMVVIRLVD  120
SKRWRIVEVE LEHNHQVSPQ IKRFYKSHKK MILAAKSAQP LPEPVTEIHT IKLYRTPVMD  180
VGSNGYSNFT ESEALHRKRM KEVVADLESR SSSFELKTKC NFEVQLCKVY TKEIFKRFQL  240
EVEGMYSCFN TRQVSVNGPI ITYIVKERVE VEGKEKEVRC YEVLYETTQV DIRCICSLFN  300
YKGYLCRHAL NVLNYNGVEE VPSRYILPRW RKDFKCRYLL HHGSSNIDVY NPVYWHNHLY  360
KLALPVAEEG AQSEEHYKTT LQALEELLNK FHLVEDTLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	3e-62	FAR1 family protein