PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g519420.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 461aa MW: 50127.1 Da PI: 7.3926

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g519420.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	25.3	3e-08	2	27	15	41
TCR 15 kkYCeCfaagkkCseeCkCedCkNkee 41 kYCeCfaag +C+ C+C++C+N+ + Pd.00g519420.m01 2 TKYCECFAAGIYCEG-CNCSNCHNNVD 27 59**********9.******986 PP
2	TCR	50.6	3.9e-16	73	112	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+C+ks ClkkYCeCf+a+ Cse+CkC +CkN e Pd.00g519420.m01 73 KHNKGCHCRKSGCLKKYCECFQANILCSENCKCMGCKNFE 112 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MTKYCECFAA GIYCEGCNCS NCHNNVDNEA ARQEAVGLIL ERNPNAFRPK IASSPQESRD 60 GREDAGEIQA PGKHNKGCHC RKSGCLKKYC ECFQANILCS ENCKCMGCKN FEGSEERRAL 120 HHEDHNTVAY MQQANAAISG AIGSSGYGTP LVSRKRKSYE LYFSTTNQTT HPIKQPQQEN 180 HLRPPMASSS LSSVPNCLTA NAAVSRSSKS TYRSPLADII QSKNIKDLCS RLVVVSGAAA 240 EALAGNRHRE TIDESSTNLS TQEGKECKKE HDIQNSVHDD HLGVNEADRD ESSYSGLNGG 300 DVQNSRPMSP GTLALMCDEQ DKMFMAAGLP NGVGSSSPSM TQKSTQEIGC TEVYAEQERL 360 VLTGFRDFLN HLITRGSIKE TMCSPQAKRE RVSQKEPVQG GTAKPSPEPR WQKEAYSNGV 420 AKSPVSANGK MLQPVTTLHP VAMVTSGDND LSLKVGLPIE K

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MTKYCECFAA GIYCEGCNCS NCHNNVDNEA ARQEAVGLIL ERNPNAFRPK IASSPQESRD  60
GREDAGEIQA PGKHNKGCHC RKSGCLKKYC ECFQANILCS ENCKCMGCKN FEGSEERRAL  120
HHEDHNTVAY MQQANAAISG AIGSSGYGTP LVSRKRKSYE LYFSTTNQTT HPIKQPQQEN  180
HLRPPMASSS LSSVPNCLTA NAAVSRSSKS TYRSPLADII QSKNIKDLCS RLVVVSGAAA  240
EALAGNRHRE TIDESSTNLS TQEGKECKKE HDIQNSVHDD HLGVNEADRD ESSYSGLNGG  300
DVQNSRPMSP GTLALMCDEQ DKMFMAAGLP NGVGSSSPSM TQKSTQEIGC TEVYAEQERL  360
VLTGFRDFLN HLITRGSIKE TMCSPQAKRE RVSQKEPVQG GTAKPSPEPR WQKEAYSNGV  420
AKSPVSANGK MLQPVTTLHP VAMVTSGDND LSLKVGLPIE K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	158	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-113	CPP family protein