PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g520600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 217aa    MW: 24535.2 Da    PI: 9.8646
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g520600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.63.4e-16129210188
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                       f+k +++s+v+   +l lp +f++++  k  ++  +tl de+g + +  +    ++++  l++GW++F+ a++L +gD +vF+l++ +
  Pd.00g520600.m01 129 FVKPMLQSHVTGGFWLGLPIHFCNKNLPK--RDESVTLVDEDGDECQTVY--LANKRG--LSGGWRGFAIAHELVDGDALVFQLIRPK 210
                       89*********************999433..4457***************..555555..9**********************99743 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVAAKLSYEE SRRQRMEENK KRMEALNLPQ LAQALKAPSF PKPTPMKRAK PQTVEKQMVV  60
VRRSSRVANL PTPVYKEIAV DPLRMPRRHS TSKHRDFSNR VYASDEARAE ATERAEELES  120
GLGSDHPTFV KPMLQSHVTG GFWLGLPIHF CNKNLPKRDE SVTLVDEDGD ECQTVYLANK  180
RGLSGGWRGF AIAHELVDGD ALVFQLIRPK TLKVIDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.17e-66B3 family protein