PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g520620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 229aa    MW: 26013.8 Da    PI: 10.5162
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g520620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.95.1e-15129217298
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       +k+ +ps+ +    l+l ++f+ e+ +k  ++  +tl d +g+++  ++      +r+ l++GWkeF+ a++L egD +vF+l++ + f  +v
  Pd.00g520620.m01 129 VKTILPSHISGGFFLRLKRQFCMENLSK--GDEVMTLVDVDGNEYPTRY----LAQRFGLSAGWKEFAFAHDLVEGDALVFQLIRPTAF--KV 213
                       5888999999999*********999444..44589**************....455689*************************98888..77 PP

                       EEE- CS
                B3  95 kvfr 98 
                        ++r
  Pd.00g520620.m01 214 YIVR 217
                       6665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVMAKPKLLY EESRQQRLEE NRKKMAALNL RQLAQLAHPD PVELARPRTF EKHLVQVRRS  60
TRVSNHSSPV YKEVFVERAR LPRRSYRSSW QKGLWNRTNA SASDEARAAA LHEAQELVSG  120
LGSDNPTIVK TILPSHISGG FFLRLKRQFC MENLSKGDEV MTLVDVDGNE YPTRYLAQRF  180
GLSAGWKEFA FAHDLVEGDA LVFQLIRPTA FKVYIVRVKR SEGSSAGSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-37B3 family protein