PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g522680.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 549aa MW: 61038.4 Da PI: 6.8267

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g522680.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.8	5e-33	330	384	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHerFveav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl Pd.00g522680.m01 330 RPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKVMNVEGLTIYHVKSHLQKYRL 384 59****************************************************8 PP
2	Myb_DNA-binding	53.5	5.6e-17	332	383	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++v+av++l g t+k + + m+ +g+t +++ks++qky+ Pd.00g522680.m01 332 RMRWTPELHERFVEAVNKLDGAekaTPKGVLKVMNvEGLTIYHVKSHLQKYR 383 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MLKTQSFARS QRAKSKDANY KASSFAFYRD TFANPIAHEP RFYKILVHIT ILSKYKISIL 60 RSSTLEDGLS PEKTMLNVCP YTTHWWIYRF QPVQVRYPNC GILHHLLDRL MKMHDFLGSE 120 SEGRSLAGSE CSSARLSPFI RAETLGSPTN IRGSSVQHSQ NTFSRSSVFC TSLYQSSSSS 180 SENSRQLGNL PFLPHPPTYS QSISAVDSKS PILLSDDMSN QYDDEQSEDL MKDFLNLHGD 240 GSHGSFHGIS CGSDTLALTE QLELQFLSDQ LDMAITDNGE NPGLDEIYEI PQASPKPSIG 300 LTCSKSCQLT TPPVDALSSH PSPGPSPAHR PRMRWTPELH ERFVEAVNKL DGAEKATPKG 360 VLKVMNVEGL TIYHVKSHLQ KYRLAKYMPE KREDKKASSS EEKKAASSSS ESDGRRKGSI 420 QITEALRMQM EVQKQLHEQL EVQRALQLRI EDHAKYLQKI LEEQQKAGSA LLSPQALSSL 480 ATNSIQEPEQ QPSSSAGVSP MQPAESDSSS PLSLKHKATD SSESEPPACT KKQRLEEKPD 540 EGVVENPQQ

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MLKTQSFARS QRAKSKDANY KASSFAFYRD TFANPIAHEP RFYKILVHIT ILSKYKISIL  60
RSSTLEDGLS PEKTMLNVCP YTTHWWIYRF QPVQVRYPNC GILHHLLDRL MKMHDFLGSE  120
SEGRSLAGSE CSSARLSPFI RAETLGSPTN IRGSSVQHSQ NTFSRSSVFC TSLYQSSSSS  180
SENSRQLGNL PFLPHPPTYS QSISAVDSKS PILLSDDMSN QYDDEQSEDL MKDFLNLHGD  240
GSHGSFHGIS CGSDTLALTE QLELQFLSDQ LDMAITDNGE NPGLDEIYEI PQASPKPSIG  300
LTCSKSCQLT TPPVDALSSH PSPGPSPAHR PRMRWTPELH ERFVEAVNKL DGAEKATPKG  360
VLKVMNVEGL TIYHVKSHLQ KYRLAKYMPE KREDKKASSS EEKKAASSSS ESDGRRKGSI  420
QITEALRMQM EVQKQLHEQL EVQRALQLRI EDHAKYLQKI LEEQQKAGSA LLSPQALSSL  480
ATNSIQEPEQ QPSSSAGVSP MQPAESDSSS PLSLKHKATD SSESEPPACT KKQRLEEKPD  540
EGVVENPQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-105	G2-like family protein