PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g529340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 252aa    MW: 28057.5 Da    PI: 8.0893
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g529340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.16.7e-2158107255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Pd.00g529340.m01  58 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 107
                       59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MVLQQQQEHQ QKEQIAALAS PASLQSQYQH QNPRTLKFLS PKAIPMKQVG APSKPTKLYR  60
GVRQRHWGKW VAEIRLPKNR TRLWLGTFDT AEEAALAYDK AAYKLRGDFA RLNFPHLKHQ  120
GALVSGDFGH YKPLHSSVDA KLQAICQSLA ANSAKQGKTG ELCSVAERKP AISSPSEVSL  180
KTELRGEWEL TGVECYRPEI SSSPSQSVES SAGSSSPESD ITFLEFSDSQ WDEAENFGLE  240
KYPSVEIDWS AI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.13e-57ERF family protein