PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g531470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 850aa MW: 91926.6 Da PI: 6.803

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g531470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	27.1	8.2e-09	390	416	14	41
TCR 14 lkkYCeCfaagkkCseeCkCedCkNkee 41 + kYCeCfaag +C+ C+C++C+N+ + Pd.00g531470.m01 390 MTKYCECFAAGIYCEG-CNCSNCHNNVD 416 579**********9.******986 PP
2	TCR	49.5	8.4e-16	462	501	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+C+ks ClkkYCeCf+a+ Cse+CkC +CkN e Pd.00g531470.m01 462 KHNKGCHCRKSGCLKKYCECFQANILCSENCKCMGCKNFE 501 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 850 aa Download sequence
MHRSLLNAHQ QPLSFTLSSR NSNSPSTVLS HVAQTMAHAC PRSLPTSEPK LSYKYRSSSQ 60 TRSVSDSTET AMSPAMEEAL DDAQKLRDEF LEVLRSRRSG EVPLSVEPAK PVAHPLFQEA 120 SPPTFSEAMN ACPKANIPNF KDKLHEENLY LITEEGEQGR LPVWILSMKE NNTQKRPAVV 180 FLHSTNKNKE WLRPLLEAYA SRGYVAIAID SRYHGERASN ISTYRDALVS SWKKGDTMPF 240 LFDTTWDLIK LADYLTQRED VDPTRIGITG ESLGERNGLS NRTEEIGEAI GFHDGVSSVG 300 ERSVAGGAAT ATATGTVAGA AVTKLTGNIA RAFAVTVATA AAGNAVTETA NAATGDSTVS 360 GSAESRAGGE LSDSAPGAQA FNLDIASEIM TKYCECFAAG IYCEGCNCSN CHNNVDNEAA 420 RQEAVGLILE RNPNAFRPKI ASSPQESRDG REDAGEIQAP GKHNKGCHCR KSGCLKKYCE 480 CFQANILCSE NCKCMGCKNF EGSEERRALH HEDHNTVAYM QQANAAISGA IGSSGYGTPL 540 VSRKRKSYEL YFSTTNQTTH PIKQPQQENH LRPPMASSSL SSVPNCRTAN AAVSRSSKST 600 YRSPLADIIQ SKNIKDLCSR LVVVSGAAAE ALAGNRRRET IDESSTNLST QEGKECKKEH 660 DIQNSLHDDH LGVNEADRDE SSYSGLNGGD VQNSRPMSPG TLALMCDEQD KMFMAAGLPN 720 GVGSSSPSMT QKSTQEIGCT EVYAEQERLV LTGFRDFLNH LITRGSIKET MCSPQAKRER 780 VSQKEPVQGG TAKPSPEPRW QKEAYSNGVA KSPVSANGKM LQPVTTLHPV ATVTSGDNDL 840 SLKVGLPIEK

Sequence ? help Back to Top

Protein Sequence Length: 850 aa Download sequence

MHRSLLNAHQ QPLSFTLSSR NSNSPSTVLS HVAQTMAHAC PRSLPTSEPK LSYKYRSSSQ  60
TRSVSDSTET AMSPAMEEAL DDAQKLRDEF LEVLRSRRSG EVPLSVEPAK PVAHPLFQEA  120
SPPTFSEAMN ACPKANIPNF KDKLHEENLY LITEEGEQGR LPVWILSMKE NNTQKRPAVV  180
FLHSTNKNKE WLRPLLEAYA SRGYVAIAID SRYHGERASN ISTYRDALVS SWKKGDTMPF  240
LFDTTWDLIK LADYLTQRED VDPTRIGITG ESLGERNGLS NRTEEIGEAI GFHDGVSSVG  300
ERSVAGGAAT ATATGTVAGA AVTKLTGNIA RAFAVTVATA AAGNAVTETA NAATGDSTVS  360
GSAESRAGGE LSDSAPGAQA FNLDIASEIM TKYCECFAAG IYCEGCNCSN CHNNVDNEAA  420
RQEAVGLILE RNPNAFRPKI ASSPQESRDG REDAGEIQAP GKHNKGCHCR KSGCLKKYCE  480
CFQANILCSE NCKCMGCKNF EGSEERRALH HEDHNTVAYM QQANAAISGA IGSSGYGTPL  540
VSRKRKSYEL YFSTTNQTTH PIKQPQQENH LRPPMASSSL SSVPNCRTAN AAVSRSSKST  600
YRSPLADIIQ SKNIKDLCSR LVVVSGAAAE ALAGNRRRET IDESSTNLST QEGKECKKEH  660
DIQNSLHDDH LGVNEADRDE SSYSGLNGGD VQNSRPMSPG TLALMCDEQD KMFMAAGLPN  720
GVGSSSPSMT QKSTQEIGCT EVYAEQERLV LTGFRDFLNH LITRGSIKET MCSPQAKRER  780
VSQKEPVQGG TAKPSPEPRW QKEAYSNGVA KSPVSANGKM LQPVTTLHPV ATVTSGDNDL  840
SLKVGLPIEK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	542	547	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-110	CPP family protein