PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g532280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 117aa    MW: 13488.5 Da    PI: 8.6267
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g532280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY50.73.7e-16691062359
                       EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY  23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Pd.00g532280.m01  69 GYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 106
                       7****9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MDSRNRYCQI RVLKRLEEAL RFLGDNCGLA IQWLEDIVEK NRVKKTIRVP AISSKIADIP  60
PDEYSWRKGY YKCSTVRGCP ARKHVERAPD DPAMLIVTYE GEHRHAPENV GLAFEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.23e-38WRKY family protein