PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g533880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 297aa    MW: 33624.7 Da    PI: 8.4738
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g533880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.26.5e-09231278653
                       S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
          Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                       +++k  +e+Le++++k++ p+ +++  + + ++L+ ++V  WF  +R 
  Pd.00g533880.m01 231 RLKKAHVETLESVYRKTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRS 278
                       5778899*************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MAFASALNTP KGLHCLMLPS SRNERPPTNL ILPRQFPARF SSTLALARRR NQRTEVASSK  60
PKINKKILAK KEVKDEEEED VDEDAIDALF RLLEEDLKND DASLDDEDLT EEELAKLEQE  120
LKTWQLRRLA AALKVGRRKT SIKILAAELC LDRPVVLELL RNPPPSLLMM CAALPDEPAP  180
TISVSQTMPI ETVVETTVET VVETTTESSE VETTVNKPIH VMQQKFSAQK RLKKAHVETL  240
ESVYRKTKRP TNAMISSIVH VTNLPRKRVV KWFEDKRSED GVTDSRLPYR RPAPNTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.18e-63HB-other family protein