PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g542040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 260aa    MW: 28989.1 Da    PI: 8.1363
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g542040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.32.1e-161492371095
                       HHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  10 vlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       ++ ++rlv+pkk+ae+h  ++++++++ + ++d +gr W+++++ +++s++   yvl+ G k++   n+ ++gD+v+F++++ +e++l ++
  Pd.00g542040.m01 149 SGHTARLVIPKKCAEAHfpKISETQGFPIAIQDYTGRDWKFQYRCWQNSNSkkmYVLE-GLKDYMILNQWQVGDTVTFHRTE-QEGKLIIG 237
                       456699*************99999*******************885555555548888.********************654.67767766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MASEHCFFCK AEIAEFITGW PLKDGSFAKL CGKCGYAYIH DQFCETFHSK SDGWRHCDGC  60
KKRLHCGCIM SCHTYTELDY GGVGCSKCLL RSKKSMESAA NEGTYLTTLS YSDTHSVVSN  120
EIIAECCSPG SSKGKASAHI GENSNVDSSG HTARLVIPKK CAEAHFPKIS ETQGFPIAIQ  180
DYTGRDWKFQ YRCWQNSNSK KMYVLEGLKD YMILNQWQVG DTVTFHRTEQ EGKLIIGTKK  240
TPASIASVQA LKEKIWKLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.17e-30B3 family protein