PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g542240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 154aa    MW: 17415 Da    PI: 4.7823
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g542240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.78.7e-1339127196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsefel 92 
                       f+ vlt+ +  ++ +lv+p +f ++    + +s+  ++ + +g+ We+ +   ++s++  l  +Wk F+ +n+Lk+gD +vF+ l+  s+++l
  Pd.00g542240.m01  39 FDVVLTKTNIERLYQLVVPGRFSATL---PSCSIP-MVLTFRGKNWEMIY--HGSSSHKRLD-NWKAFAIDNNLKVGDACVFEqLEC-SSTRL 123
                       677888888899999*******9766...345544.557789********..8888877787.********************5444.55555 PP

                       EEEE CS
                B3  93 vvkv 96 
                       v++v
  Pd.00g542240.m01 124 VFRV 127
                       5443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MTNHPLMKGE PQMGDQLTSN PVIELEGDEF WPLSGKPFFD VVLTKTNIER LYQLVVPGRF  60
SATLPSCSIP MVLTFRGKNW EMIYHGSSSH KRLDNWKAFA IDNNLKVGDA CVFEQLECSS  120
TRLVFRVQIL RGDIPSEFLD KLDGDNVDAP IVLE