PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g544060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 175aa MW: 19837.9 Da PI: 8.7774

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g544060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.6	1.3e-41	53	130	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+++C adls+ak+yhrrhkvC+ hska+vvlvsgl+qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk++ Pd.00g544060.m01 53 CCQADRCPADLSDAKQYHRRHKVCDLHSKAQVVLVSGLRQRFCQQCSRFHELPEFDDTKRSCRRRLAGHNERRRKNSV 130 6**************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MEKPHVVVKE EEEEDEEFDH HQQPEDHDKK QKGIVGGSGS VKRSGTSGGG TRCCQADRCP 60 ADLSDAKQYH RRHKVCDLHS KAQVVLVSGL RQRFCQQCSR FHELPEFDDT KRSCRRRLAG 120 HNERRRKNSV ESNAEGPSRN GTGTQLKDVC GQGDNSGRIR ITIQGNSTYK HFQIR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	4e-47	SBP family protein