PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g544350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 208aa    MW: 24198.5 Da    PI: 7.1469
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g544350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.3e-091664555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         +E++RR++++  +++L +llP +  ++++ l   +   +A++YIk+L+
  Pd.00g544350.m01 16 RRVIEKNRRNQMKVLYSKLNSLLPRQ--NSQEPLCLPDQIDEAINYIKNLE 64
                      5689*********************6..26666***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDRNQGSQSS STKVERRVIE KNRRNQMKVL YSKLNSLLPR QNSQEPLCLP DQIDEAINYI  60
KNLESKLQKS KEKRDSLKGN RKRSHTACTN LDSMRSSKPP QIEIHEMGST LEVVLISGLD  120
NHQFMFTEII RILHEEQADV VHVSLSTLGD SIFHVIRAEM GKYMLDFGAA KITEKLRRFV  180
NGSTSDEELQ REYLWDFEIY PETIWDQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17383KRDSLKGNRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-41bHLH family protein