PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g545230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 230aa MW: 25359.9 Da PI: 3.7085

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g545230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	85.7	6.3e-27	21	120	2	87
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT..........X....TTSEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks..........k....ekiwe 80 Fl+k+y++++d++++ ++sws+ +nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+Y + ++++ ++ ++ + e+++e Pd.00g545230.m01 21 FLNKTYDMVDDPSTNAVVSWSNGNNSFVVWNVPEFSRDLLPKYFKHNNFSSFVRQLNTYVAQVLEENMHNFQEdavmpestqmQggvpESTVE 113 9**********************************************************9888877766644445555544431334455555 PP EEESXXX CS HSF_DNA-bind 81 FkhksFk 87 + +F Pd.00g545230.m01 114 IPNANFM 120 5555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MEGVEDAATM INLANTPPPP FLNKTYDMVD DPSTNAVVSW SNGNNSFVVW NVPEFSRDLL 60 PKYFKHNNFS SFVRQLNTYV AQVLEENMHN FQEDAVMPES TQMQGGVPES TVEIPNANFM 120 SSETGNAEYM DMSAVLDGTL PTETDAFSPE PDVDALLGSS LPGITDIFWE QFLPASPLTG 180 DVDEINLSST DGGTTDQELK LTEENGWDKT QHMNHITEQM ELLAPGSRIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17750.1	9e-35	HSF family protein