PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g546100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 254aa MW: 29374.9 Da PI: 5.0995

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g546100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	75.7	1.1e-23	6	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyW 83 +p+G+rF+P++eel+ +yL ++v+g++ + v++++d+y + ePw++ + + + +++++y F++ +kk+++g+r r++ +g+W Pd.00g546100.m01 6 VPVGYRFRPSEEELLLHYLLPRVNGNDYPK-GVVTDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVW 95 599**********************999.99***98797423322..24355688***************643344999 PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k + k++ + g+++g++k + + + +p+ +W+m e++l Pd.00g546100.m01 96 KGEDSGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137 ********9.999*******655555..89*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAGYQVPVGY RFRPSEEELL LHYLLPRVNG NDYPKGVVTD CDLYGTKEPW EIWRDFHHSS 60 PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM 120 NPGSPHDDRW IMLEFQLDES LVRVRNKETV VLCLVRKKET SGKSKLEERQ THEVDMPSRG 180 EIQAQHVHDD QQQHIDASTY DQLRVLEDFL MKDVEGEQDT MVNPTLLAQY GQQGTSTEDQ 240 LRFLEDYLMN DIEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61910.1	3e-21	NAC family protein